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Two of those are related to the little outside air quality sensors and shouldn't affects anything, you can check their wiring and such to see you didn't damage them.
The 2fa3 is normal after the time and the 5f78 code I don't know about but every time i do something like a flash or reset anything in the car or disconnect the battery I'll get several temporary xdrive codes and this seems to go away but I don't even know if that's a dsc code I'd clear them and see what happens.
Those 4 files you don't need to mess with at all unless trying to go back to stock. All you need is to flash the rsa delete as you have and pick between the 330i tune or mafless tune
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